Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase family protein | FD718_10140 | Not Available | Negative | 2248017 - 2249273 | 46479.4 |
| lysine-sensitive aspartokinase 3 | FD718_10150 | Not Available | Positive | 2253268 - 2254617 | 48917.7 |
| aspartate-semialdehyde dehydrogenase | FD718_10155 | Not Available | Positive | 2254774 - 2255910 | 41470.1 |
| hypothetical protein | FD718_10160 | Not Available | Negative | 2256003 - 2256338 | 12584.2 |
| phosphoribosylglycinamide formyltransferase | FD718_10165 | Not Available | Positive | 2256589 - 2257380 | 29663.6 |
| phosphoribosylglycinamide formyltransferase | FD718_10170 | Not Available | Positive | 2257708 - 2258499 | 30007.0 |
| Trna-ser | Not Available | Not Available | Positive | 2258628 - 2258715 | Not Available |
| capsular biosynthesis protein | FD718_10175 | Not Available | Negative | 2258708 - 2259603 | 33482.6 |
| capsular biosynthesis protein | FD718_10180 | Not Available | Negative | 2259618 - 2261792 | 80749.2 |
| polysaccharide export protein | FD718_10185 | Not Available | Negative | 2261796 - 2262329 | 19551.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


