Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/tyrosine/aromatic aminotransferase | FD718_10080 | Not Available | Negative | 2217092 - 2218273 | 42905.6 |
| duf3081 family protein | FD718_10085 | Not Available | Positive | 2218441 - 2218749 | 11749.7 |
| acetyl-coa c-acyltransferase fada | FD718_10090 | Not Available | Negative | 2218822 - 2219985 | 41259.1 |
| fatty acid oxidation complex subunit alpha fadb | FD718_10095 | Not Available | Negative | 2220000 - 2222147 | 78710.6 |
| 4-hydroxybutyrate coa-transferase | FD718_10100 | Not Available | Negative | 2222164 - 2223471 | 46812.0 |
| helix-turn-helix transcriptional regulator | FD718_10105 | Not Available | Positive | 2223738 - 2224769 | 39678.5 |
| mfs transporter | FD718_10110 | Not Available | Negative | 2224805 - 2226370 | 57460.1 |
| right-handed parallel beta-helix repeat-containing protein | FD718_10125 | Not Available | Negative | 2228795 - 2245910 | 597285.0 |
| duf2750 domain-containing protein | FD718_10130 | Not Available | Positive | 2246184 - 2246576 | 15109.6 |
| carboxynorspermidine decarboxylase | FD718_10135 | Not Available | Negative | 2246822 - 2247946 | 41135.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


