Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | FD718_10030 | Not Available | Positive | 2205192 - 2205935 | 28077.4 |
| sodium:proton antiporter | FD718_10035 | Not Available | Positive | 2206259 - 2207539 | 46477.2 |
| vrr-nuc domain-containing protein | FD718_10040 | Not Available | Positive | 2207689 - 2209344 | 65126.0 |
| hypothetical protein | FD718_10045 | Not Available | Negative | 2209341 - 2209706 | 14089.4 |
| duf1311 domain-containing protein | FD718_10050 | Not Available | Positive | 2209889 - 2210503 | 22726.1 |
| molybdenum cofactor cytidylyltransferase | FD718_10055 | Not Available | Negative | 2210567 - 2211163 | 22184.9 |
| xdhc family protein | FD718_10060 | Not Available | Negative | 2211160 - 2212122 | 35751.6 |
| c-type cytochrome | FD718_10065 | Not Available | Negative | 2212172 - 2213401 | 45235.1 |
| (2fe-2s)-binding protein | FD718_10070 | Not Available | Negative | 2213398 - 2213928 | 19486.5 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | FD718_10075 | Not Available | Negative | 2213925 - 2216771 | 105372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


