Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_09980 | Not Available | Negative | 2197328 - 2197699 | 13651.2 |
| monooxygenase | FD718_09985 | Not Available | Negative | 2197704 - 2198012 | 11537.8 |
| lysr family transcriptional regulator | FD718_09990 | Not Available | Positive | 2198122 - 2199012 | 32679.4 |
| hypothetical protein | FD718_09995 | Not Available | Positive | 2199099 - 2199617 | 19345.7 |
| isoprenylcysteine carboxylmethyltransferase family protein | FD718_10000 | Not Available | Negative | 2199850 - 2200308 | 17788.5 |
| alpha/beta fold hydrolase | FD718_10005 | Not Available | Negative | 2200421 - 2201233 | 30090.5 |
| site-specific dna-methyltransferase | FD718_10010 | Not Available | Positive | 2201386 - 2202054 | 25969.1 |
| hd domain-containing protein | FD718_10015 | Not Available | Negative | 2202043 - 2202672 | 23736.2 |
| mate family efflux transporter | FD718_10020 | Not Available | Negative | 2202740 - 2204089 | 48785.3 |
| sam-dependent methyltransferase | FD718_10025 | Not Available | Negative | 2204233 - 2204811 | 22036.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


