Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_09880 | Not Available | Negative | 2173463 - 2174086 | 23567.1 |
| moxr family atpase | FD718_09885 | Not Available | Positive | 2174532 - 2175488 | 35629.1 |
| duf58 domain-containing protein | FD718_09890 | Not Available | Positive | 2175485 - 2176432 | 36248.6 |
| duf4381 domain-containing protein | FD718_09895 | Not Available | Positive | 2176378 - 2176911 | 20303.5 |
| vwa domain-containing protein | FD718_09900 | Not Available | Positive | 2176918 - 2177883 | 35942.1 |
| vwa domain-containing protein | FD718_09905 | Not Available | Positive | 2177876 - 2179312 | 53120.6 |
| yfcc family protein | FD718_09910 | Not Available | Negative | 2179462 - 2180919 | 52044.9 |
| ribonuclease e inhibitor rrab | FD718_09915 | Not Available | Positive | 2181641 - 2182042 | 15110.0 |
| glycoside hydrolase family 2 protein | FD718_09920 | Not Available | Positive | 2182344 - 2184770 | 93491.8 |
| duf2061 domain-containing protein | FD718_09925 | Not Available | Negative | 2184985 - 2185386 | 14880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


