Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | FD718_09830 | Not Available | Negative | 2161562 - 2162302 | 27463.9 |
| fumarate reductase (quinol) flavoprotein subunit | FD718_09835 | Not Available | Negative | 2162302 - 2164110 | 66544.8 |
| elongation factor p--(r)-beta-lysine ligase | FD718_09840 | Not Available | Positive | 2164665 - 2165636 | 36299.8 |
| carbonic anhydrase family protein | FD718_09845 | Not Available | Negative | 2165920 - 2166648 | 26721.7 |
| methyl-accepting chemotaxis protein | FD718_09850 | Not Available | Negative | 2166823 - 2168703 | 67896.1 |
| slc13/dass family transporter | FD718_09855 | Not Available | Negative | 2168901 - 2170316 | 50837.6 |
| phosphatidylserine decarboxylase | FD718_09860 | Not Available | Negative | 2170458 - 2171339 | 32460.8 |
| small ribosomal subunit biogenesis gtpase rsga | FD718_09865 | Not Available | Negative | 2171534 - 2172589 | 39742.9 |
| oligoribonuclease | FD718_09870 | Not Available | Positive | 2172663 - 2173208 | 21001.1 |
| Trna-met | Not Available | Not Available | Positive | 2173341 - 2173417 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


