Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fusc family protein | FD718_09730 | Not Available | Positive | 2138071 - 2139108 | 38879.7 |
| hoxn/hupn/nixa family nickel/cobalt transporter | FD718_09735 | Not Available | Positive | 2139296 - 2140324 | 37704.8 |
| nitrogen fixation protein nifw | FD718_09740 | Not Available | Negative | 2140345 - 2140620 | 10829.9 |
| tetr/acrr family transcriptional regulator | FD718_09745 | Not Available | Positive | 2140764 - 2141369 | 22562.2 |
| mfs transporter | FD718_09750 | Not Available | Negative | 2141366 - 2142901 | 56458.8 |
| hlyd family secretion protein | FD718_09755 | Not Available | Negative | 2142913 - 2143920 | 36775.4 |
| anaerobic c4-dicarboxylate transporter | FD718_09760 | Not Available | Negative | 2144310 - 2145617 | 45478.9 |
| aspartate ammonia-lyase | FD718_09765 | Not Available | Negative | 2145728 - 2147188 | 52817.7 |
| membrane protein fxsa | FD718_09770 | Not Available | Positive | 2147653 - 2148177 | 18900.2 |
| mate family efflux transporter | FD718_09775 | Not Available | Negative | 2148306 - 2149664 | 48775.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


