Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | FD718_09680 | Not Available | Positive | 2123136 - 2124860 | 62970.7 |
| efflux rnd transporter permease subunit | FD718_09685 | Not Available | Positive | 2124860 - 2127985 | 114018.0 |
| copper-binding protein | FD718_09690 | Not Available | Positive | 2128111 - 2128722 | 22881.4 |
| dipeptide/tripeptide permease dtpa | FD718_09695 | Not Available | Negative | 2128825 - 2130306 | 53620.8 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | FD718_09700 | Not Available | Positive | 2130665 - 2131474 | 29810.6 |
| dha2 family efflux mfs transporter permease subunit | FD718_09705 | Not Available | Negative | 2131574 - 2133112 | 56007.1 |
| hlyd family secretion protein | FD718_09710 | Not Available | Negative | 2133115 - 2134158 | 37180.8 |
| hypothetical protein | FD718_09715 | Not Available | Positive | 2134963 - 2135529 | 20867.4 |
| lysr family transcriptional regulator | FD718_09720 | Not Available | Positive | 2135997 - 2136935 | 34893.2 |
| oxygen-insensitive nad(p)h-dependent nitroreductase nfsb | FD718_09725 | Not Available | Negative | 2137011 - 2137664 | 24267.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


