Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar o-acetyltransferase | FD718_09630 | Not Available | Negative | 2113474 - 2114091 | 23161.7 |
| asch domain-containing protein | FD718_09635 | Not Available | Positive | 2114328 - 2114660 | 12912.4 |
| Trna-pseudo | Not Available | Not Available | Positive | 2114790 - 2114872 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 2115019 - 2115103 | Not Available |
| response regulator | FD718_09645 | Not Available | Positive | 2115257 - 2116909 | 63115.3 |
| glsb/yeaq/ymge family stress response membrane protein | FD718_09650 | Not Available | Negative | 2117072 - 2117320 | 8409.6 |
| exodeoxyribonuclease iii | FD718_09655 | Not Available | Positive | 2117784 - 2118590 | 30963.8 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | FD718_09660 | Not Available | Positive | 2118811 - 2120559 | 65916.3 |
| hypothetical protein | FD718_09670 | Not Available | Positive | 2121314 - 2121715 | 14703.5 |
| tolc family protein | FD718_09675 | Not Available | Positive | 2121853 - 2123127 | 47942.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


