Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yjbh domain-containing protein | FD718_09580 | Not Available | Positive | 2104072 - 2106285 | 83491.8 |
| ompa family protein | FD718_09585 | Not Available | Positive | 2106623 - 2107585 | 34091.4 |
| leucine-rich repeat domain-containing protein | FD718_09590 | Not Available | Positive | 2107799 - 2107954 | 5700.58 |
| hypothetical protein | FD718_09595 | Not Available | Positive | 2108402 - 2108695 | 10858.1 |
| hypothetical protein | FD718_09600 | Not Available | Negative | 2108756 - 2109001 | 9513.55 |
| lysophospholipid acyltransferase family protein | FD718_09605 | Not Available | Negative | 2109016 - 2110779 | 66018.7 |
| yhs domain-containing protein | FD718_09610 | Not Available | Negative | 2110793 - 2111230 | 16418.4 |
| d-alanine--d-alanine ligase | FD718_09615 | Not Available | Negative | 2111246 - 2112310 | 40397.2 |
| hypothetical protein | FD718_09620 | Not Available | Negative | 2112310 - 2112882 | 21940.5 |
| gaf domain-containing protein | FD718_09625 | Not Available | Positive | 2113009 - 2113473 | 17486.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


