Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01620 family protein | FD718_09525 | Not Available | Positive | 2092390 - 2093418 | 38115.1 |
| lysr family transcriptional regulator | FD718_09530 | Not Available | Positive | 2093541 - 2094464 | 35180.5 |
| transcriptional regulator tyrr | FD718_09535 | Not Available | Positive | 2094684 - 2096225 | 58179.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | FD718_09540 | Not Available | Negative | 2096328 - 2096813 | 18443.3 |
| 30s ribosomal protein s5 alanine n-acetyltransferase | FD718_09545 | Not Available | Positive | 2096883 - 2097479 | 23453.1 |
| pyruvate kinase | FD718_09550 | Not Available | Negative | 2097604 - 2099049 | 51426.2 |
| polysaccharide export protein | FD718_09560 | Not Available | Negative | 2100437 - 2101591 | 42062.2 |
| hypothetical protein | FD718_09565 | Not Available | Positive | 2102159 - 2102383 | 6681.68 |
| yjbf family lipoprotein | FD718_09570 | Not Available | Positive | 2102513 - 2103217 | 25843.2 |
| hypothetical protein | FD718_09575 | Not Available | Positive | 2103236 - 2104072 | 31743.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


