Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | FD718_09475 | Not Available | Negative | 2082736 - 2083560 | 30839.9 |
| atp-binding cassette domain-containing protein | FD718_09480 | Not Available | Negative | 2083557 - 2084555 | 37393.4 |
| peptide abc transporter permease sapc | FD718_09485 | Not Available | Negative | 2084555 - 2085442 | 32255.1 |
| abc transporter permease subunit | FD718_09490 | Not Available | Negative | 2085429 - 2086391 | 35797.2 |
| peptide abc transporter substrate-binding protein sapa | FD718_09495 | Not Available | Negative | 2086395 - 2088014 | 60379.7 |
| phage shock protein operon transcriptional activator | FD718_09500 | Not Available | Negative | 2088160 - 2089167 | 37973.2 |
| phage shock protein pspa | FD718_09505 | Not Available | Positive | 2089401 - 2090066 | 25376.1 |
| envelope stress response membrane protein pspb | FD718_09510 | Not Available | Positive | 2090133 - 2090360 | 8752.9 |
| envelope stress response membrane protein pspc | FD718_09515 | Not Available | Positive | 2090360 - 2090746 | 14629.8 |
| ycjx family protein | FD718_09520 | Not Available | Positive | 2090996 - 2092390 | 53325.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


