Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | FD718_09425 | Not Available | Negative | 2073602 - 2074075 | 17028.1 |
| hypothetical protein | FD718_09430 | Not Available | Positive | 2074259 - 2074939 | 24144.4 |
| nudix domain-containing protein | FD718_09435 | Not Available | Negative | 2075034 - 2075474 | 16311.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | FD718_09440 | Not Available | Positive | 2075605 - 2076885 | 46227.2 |
| (d)cmp kinase | FD718_09445 | Not Available | Positive | 2077168 - 2077845 | 24431.2 |
| 30s ribosomal protein s1 | FD718_09450 | Not Available | Positive | 2077970 - 2079640 | 60614.9 |
| integration host factor subunit beta | FD718_09455 | Not Available | Positive | 2079729 - 2080016 | 10792.0 |
| duf1049 domain-containing protein | FD718_09460 | Not Available | Positive | 2080226 - 2080510 | 10447.1 |
| lipopolysaccharide assembly protein lapb | FD718_09465 | Not Available | Positive | 2080517 - 2081686 | 44730.0 |
| orotidine-5'-phosphate decarboxylase | FD718_09470 | Not Available | Positive | 2081911 - 2082630 | 25685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


