Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2052699 - 2052789 | Not Available |
| glpm family protein | FD718_09330 | Not Available | Negative | 2052920 - 2053270 | 12532.9 |
| hypothetical protein | FD718_09335 | Not Available | Positive | 2053594 - 2054151 | 20671.5 |
| rna methyltransferase | FD718_09340 | Not Available | Positive | 2054251 - 2054799 | 19993.7 |
| Trna-thr | Not Available | Not Available | Positive | 2054935 - 2055010 | Not Available |
| hypothetical protein | FD718_09350 | Not Available | Positive | 2055261 - 2055740 | 18314.7 |
| Trna-phe | Not Available | Not Available | Positive | 2056098 - 2056173 | Not Available |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | FD718_09360 | Not Available | Negative | 2056250 - 2056546 | 10879.2 |
| ribonucleotide-diphosphate reductase subunit beta | FD718_09365 | Not Available | Negative | 2056543 - 2057676 | 43347.2 |
| ribonucleoside-diphosphate reductase subunit alpha | FD718_09370 | Not Available | Negative | 2057723 - 2059990 | 85011.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


