Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system ii carrier protein | FD718_09275 | Not Available | Positive | 2043049 - 2044392 | 47317.2 |
| hypothetical protein | FD718_09280 | Not Available | Positive | 2044485 - 2044778 | 10775.6 |
| l-asparaginase 2 | FD718_09285 | Not Available | Negative | 2044858 - 2045922 | 37995.2 |
| hypothetical protein | FD718_09290 | Not Available | Negative | 2046184 - 2046432 | 9323.0 |
| preprotein translocase subunit secy | FD718_09295 | Not Available | Positive | 2046791 - 2047816 | 37738.3 |
| phospholipase d family protein | FD718_09300 | Not Available | Positive | 2048007 - 2049554 | 57831.6 |
| glutathione peroxidase | FD718_09305 | Not Available | Negative | 2049630 - 2050106 | 17572.0 |
| hypothetical protein | FD718_09310 | Not Available | Positive | 2050204 - 2050722 | 20519.9 |
| molybdenum cofactor biosynthesis protein | FD718_09315 | Not Available | Negative | 2050844 - 2051074 | 8470.64 |
| chorismate synthase | FD718_09320 | Not Available | Negative | 2051389 - 2052477 | 39371.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


