Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | FD718_09225 | Not Available | Negative | 2029459 - 2030196 | 27488.7 |
| adp-ribosylglycohydrolase family protein | FD718_09230 | Not Available | Positive | 2030347 - 2031381 | 37020.1 |
| allantoin permease | FD718_09235 | Not Available | Positive | 2031394 - 2032791 | 49421.9 |
| ribokinase | FD718_09240 | Not Available | Positive | 2032791 - 2033747 | 34632.6 |
| type ii secretion system protein | FD718_09245 | Not Available | Negative | 2033790 - 2034350 | 20161.1 |
| Trna-gly | Not Available | Not Available | Positive | 2034550 - 2034624 | Not Available |
| chitinase | FD718_09255 | Not Available | Negative | 2034873 - 2037218 | 84612.6 |
| pyrimidine 5'-nucleotidase | FD718_09260 | Not Available | Positive | 2037669 - 2038343 | 25639.8 |
| branched-chain amino acid transport system ii carrier protein | FD718_09265 | Not Available | Positive | 2038654 - 2039967 | 46418.3 |
| formate c-acetyltransferase | FD718_09270 | Not Available | Positive | 2040252 - 2042549 | 85918.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


