Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit iii | FD718_09120 | Not Available | Positive | 2004582 - 2006786 | 81003.2 |
| sulfite exporter taue/safe family protein | FD718_09125 | Not Available | Negative | 2006791 - 2007522 | 26332.5 |
| lysr family transcriptional regulator | FD718_09130 | Not Available | Negative | 2007779 - 2008705 | 35506.9 |
| dead/deah box helicase | FD718_09135 | Not Available | Negative | 2008859 - 2010142 | 47665.1 |
| cell division protein ftsz | FD718_09145 | Not Available | Positive | 2011164 - 2011631 | 16999.6 |
| amino acid permease | FD718_09150 | Not Available | Positive | 2011912 - 2013318 | 50258.0 |
| phosphoethanolamine transferase | FD718_09155 | Not Available | Positive | 2013529 - 2015130 | 61804.5 |
| hypothetical protein | FD718_09160 | Not Available | Negative | 2015430 - 2015909 | 18084.4 |
| hypothetical protein | FD718_09165 | Not Available | Negative | 2016028 - 2016798 | 28340.0 |
| succinylglutamate desuccinylase/aspartoacylase family protein | FD718_09170 | Not Available | Negative | 2017126 - 2018139 | 37452.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


