Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | FD718_09070 | Not Available | Negative | 1992489 - 1994468 | 73306.6 |
| hypothetical protein | FD718_09075 | Not Available | Positive | 1994756 - 1995073 | 12642.5 |
| hypothetical protein | FD718_09080 | Not Available | Positive | 1995103 - 1995432 | 12751.5 |
| dash family cryptochrome | FD718_09085 | Not Available | Positive | 1995503 - 1996813 | 51507.7 |
| glycosyl hydrolase family protein | FD718_09090 | Not Available | Negative | 1996899 - 1998302 | 53419.2 |
| sensor domain-containing diguanylate cyclase | FD718_09095 | Not Available | Positive | 1998550 - 2000148 | 61017.5 |
| carbohydrate-binding protein | FD718_09100 | Not Available | Negative | 2000228 - 2001916 | 62197.2 |
| c-type cytochrome | FD718_09105 | Not Available | Positive | 2002198 - 2002521 | 12141.7 |
| cytochrome-c oxidase, cbb3-type subunit i | FD718_09110 | Not Available | Positive | 2002558 - 2003970 | 54490.1 |
| cytochrome-c oxidase, cbb3-type subunit ii | FD718_09115 | Not Available | Positive | 2003972 - 2004571 | 22334.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


