Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | FD718_09020 | Not Available | Negative | 1982072 - 1982389 | 12499.1 |
| duf480 domain-containing protein | FD718_09025 | Not Available | Negative | 1982546 - 1983202 | 24570.5 |
| duf3069 domain-containing protein | FD718_09030 | Not Available | Positive | 1983502 - 1983954 | 17321.6 |
| hypothetical protein | FD718_09035 | Not Available | Positive | 1984337 - 1985623 | 49356.5 |
| duf2797 domain-containing protein | FD718_09040 | Not Available | Positive | 1985699 - 1986490 | 29561.6 |
| nfed family protein | FD718_09045 | Not Available | Negative | 1986617 - 1987066 | 16918.9 |
| spfh/band 7/phb domain protein | FD718_09050 | Not Available | Negative | 1987069 - 1987989 | 33412.6 |
| ydcf family protein | FD718_09055 | Not Available | Positive | 1988258 - 1989253 | 37948.4 |
| mbl fold metallo-hydrolase | FD718_09060 | Not Available | Positive | 1989373 - 1991328 | 73040.7 |
| lysr family transcriptional regulator | FD718_09065 | Not Available | Positive | 1991436 - 1992341 | 34938.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


