Photobacterium damselae subsp. damselae strain 144bp-OG3

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae subsp. damselae strain 144bp-OG3 is a Gram-negative bacterium primarily found in coastal waters, estuaries, and marine environments, including associations with seaweeds and sediments. This organism exhibits mobility, facilitated by the presence of flagella, and thrives in mesophilic temperature ranges. Strain 144bp-OG3 has a single replicon and is notable for its diverse array of hosts, which include Homo sapiens, Pancrustacea, Aves, Mollusca, and Cetacea, specifically Alca torda and Tursiops truncatus. This broad host range indicates its ecological versatility and potential impact on various marine and terrestrial ecosystems. From a health perspective, Photobacterium damselae subsp. damselae strain 144bp-OG3 is associated with several significant infections in humans and animals. It is known to cause pneumonia, wound infections, and necrotizing fasciitis, along with other conditions such as hemorrhagic septicemia and chronic suppurative pneumonia. These health effects highlight the bacterium's pathogenic potential, particularly in aquatic organisms and humans who may come into contact with contaminated marine environments. The presence of strain 144bp-OG3 in diverse habitats and its ability to infect multiple hosts underscore its ecological importance and potential role in marine disease dynamics. Understanding its interactions within these ecosystems can provide insights into the health of marine environments and the consequences of bacterial infections in both wildlife and human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
Strainsubsp. damselae strain 144bp-OG3

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
Habitatcoastal waters; estuaries; Marine; oceans; seaweeds; sediments
Biotic relationshipNot Available
Host(s)Homo sapiens, Pancrustacea, Aves
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium damselae subsp. damselae strain 144bp-OG3

Gene Summary

Adenine Count

1418061 bp

Thymine Count

1414440 bp

Guanine Count

971104 bp

Cytosine Count

957116 bp

Genome Length

4760721 bp

Protein-coding Genes

4126 genes

Non-Coding Genes

87 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
giy-yig nuclease family proteinFD718_09020Not AvailableNegative1982072 - 198238912499.1
duf480 domain-containing proteinFD718_09025Not AvailableNegative1982546 - 198320224570.5
duf3069 domain-containing proteinFD718_09030Not AvailablePositive1983502 - 198395417321.6
hypothetical proteinFD718_09035Not AvailablePositive1984337 - 198562349356.5
duf2797 domain-containing proteinFD718_09040Not AvailablePositive1985699 - 198649029561.6
nfed family proteinFD718_09045Not AvailableNegative1986617 - 198706616918.9
spfh/band 7/phb domain proteinFD718_09050Not AvailableNegative1987069 - 198798933412.6
ydcf family proteinFD718_09055Not AvailablePositive1988258 - 198925337948.4
mbl fold metallo-hydrolaseFD718_09060Not AvailablePositive1989373 - 199132873040.7
lysr family transcriptional regulatorFD718_09065Not AvailablePositive1991436 - 199234134938.1

Displaying genes 1801 – 1810 of 4213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Haemorrhagic septicemiaCausesPMC12895208
Skin lesionsCausesPMC12895208
Necrotizing fasciitisCausesPMC12895208
Soft-tissue infectionCausesPMC8231020
Chronic suppurative pneumoniaCausesPMC9796189
Splenic lymphoid depletionCausesPMC9796189
Wound infectionsCausesPMC9796189
Hemorrhagic septicemiaCausesPMC9796189
PneumoniaCausesPMC9796189

Displaying health effects 1 – 9 of 9 in total