Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | FD718_08915 | Not Available | Positive | 1955120 - 1955713 | 22770.3 |
| hypothetical protein | FD718_08920 | Not Available | Positive | 1956072 - 1956326 | 8978.57 |
| nad(p)h-hydrate dehydratase | FD718_08925 | Not Available | Negative | 1956383 - 1957858 | 52330.2 |
| eal domain-containing protein | FD718_08930 | Not Available | Negative | 1957982 - 1959457 | 56429.5 |
| rok family protein | FD718_08935 | Not Available | Negative | 1959729 - 1960640 | 32322.0 |
| rod shape-determining protein roda | FD718_08940 | Not Available | Positive | 1960916 - 1962019 | 40429.4 |
| hypothetical protein | FD718_08945 | Not Available | Negative | 1962068 - 1962631 | 20547.7 |
| intermembrane transport protein pqib | FD718_08950 | Not Available | Negative | 1962634 - 1964277 | 60295.0 |
| paraquat-inducible protein a | FD718_08955 | Not Available | Negative | 1964314 - 1965660 | 49918.0 |
| modd protein | FD718_08960 | Not Available | Negative | 1965992 - 1966852 | 31133.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


