Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_08865 | Not Available | Positive | 1945770 - 1946045 | 10708.0 |
| hypothetical protein | FD718_08870 | Not Available | Positive | 1946172 - 1946483 | 12286.5 |
| hypothetical protein | FD718_08875 | Not Available | Negative | 1946674 - 1946973 | 10977.3 |
| aspartate/glutamate racemase family protein | FD718_08880 | Not Available | Negative | 1947117 - 1948178 | 38332.2 |
| hypothetical protein | FD718_08885 | Not Available | Negative | 1948403 - 1948702 | 10999.5 |
| hamp domain-containing histidine kinase | FD718_08890 | Not Available | Negative | 1949182 - 1950438 | 47635.9 |
| response regulator transcription factor | FD718_08895 | Not Available | Negative | 1950428 - 1951117 | 25879.4 |
| glycosyltransferase family 39 protein | FD718_08900 | Not Available | Positive | 1951423 - 1952868 | 54383.3 |
| lysr family transcriptional regulator | FD718_08905 | Not Available | Negative | 1953390 - 1953647 | 10128.5 |
| duf368 domain-containing protein | FD718_08910 | Not Available | Positive | 1954094 - 1955011 | 33241.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


