Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | FD718_08815 | Not Available | Positive | 1934334 - 1935608 | 46843.0 |
| hexitol phosphatase hxpb | FD718_08820 | Not Available | Positive | 1935670 - 1936326 | 24460.5 |
| dmt family transporter | FD718_08825 | Not Available | Positive | 1937499 - 1938437 | 34287.4 |
| voc family protein | FD718_08830 | Not Available | Positive | 1938612 - 1939097 | 18620.3 |
| duf2913 family protein | FD718_08835 | Not Available | Positive | 1939343 - 1939915 | 22030.4 |
| hypothetical protein | FD718_08840 | Not Available | Positive | 1940099 - 1940443 | 12632.0 |
| voc family protein | FD718_08845 | Not Available | Negative | 1940507 - 1940893 | 13762.4 |
| glycoside hydrolase family 92 protein | FD718_08850 | Not Available | Positive | 1941136 - 1943598 | 92318.6 |
| hypothetical protein | FD718_08855 | Not Available | Negative | 1943670 - 1944173 | 18784.6 |
| patatin family protein | FD718_08860 | Not Available | Positive | 1944402 - 1945241 | 31349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


