Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_08760 | Not Available | Negative | 1922429 - 1922701 | 10371.6 |
| hypothetical protein | FD718_08765 | Not Available | Negative | 1922851 - 1924125 | 48809.0 |
| is91 family transposase | FD718_08770 | Not Available | Negative | 1924410 - 1925468 | 41378.4 |
| integrase | FD718_08775 | Not Available | Negative | 1925465 - 1926355 | 34459.6 |
| hypothetical protein | FD718_08785 | Not Available | Positive | 1926790 - 1928031 | 47688.8 |
| qnrs family quinolone resistance pentapeptide repeat protein | FD718_08790 | Not Available | Positive | 1928580 - 1929236 | 24773.1 |
| hypothetical protein | FD718_08795 | Not Available | Positive | 1929546 - 1929833 | 11749.1 |
| sugar-binding transcriptional regulator | FD718_08800 | Not Available | Negative | 1930213 - 1931154 | 34757.5 |
| mannitol dehydrogenase family protein | FD718_08805 | Not Available | Positive | 1931388 - 1932755 | 51062.7 |
| xylulokinase | FD718_08810 | Not Available | Positive | 1932765 - 1934225 | 52732.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


