Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | FD718_08710 | Not Available | Negative | 1908810 - 1910516 | 62766.8 |
| 3-deoxy-7-phosphoheptulonate synthase | FD718_08715 | Not Available | Positive | 1910717 - 1911784 | 39086.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | FD718_08720 | Not Available | Positive | 1911805 - 1912935 | 42147.6 |
| prephenate dehydratase | FD718_08725 | Not Available | Negative | 1912986 - 1914158 | 43856.4 |
| ribosome-associated translation inhibitor raia | FD718_08730 | Not Available | Negative | 1914236 - 1914595 | 13676.3 |
| outer membrane protein assembly factor bamd | FD718_08735 | Not Available | Negative | 1914999 - 1915727 | 27965.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | FD718_08740 | Not Available | Positive | 1915896 - 1916870 | 36698.4 |
| peptidoglycan editing factor pgef | FD718_08745 | Not Available | Positive | 1916873 - 1917604 | 26574.5 |
| atp-dependent chaperone clpb | FD718_08750 | Not Available | Positive | 1917772 - 1920345 | 95646.9 |
| hnh endonuclease | FD718_08755 | Not Available | Negative | 1920956 - 1921834 | 33932.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


