Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ypjd | FD718_08660 | Not Available | Negative | 1900727 - 1901524 | 29145.2 |
| signal recognition particle protein | FD718_08665 | Not Available | Positive | 1901726 - 1903093 | 50102.5 |
| 30s ribosomal protein s16 | FD718_08670 | Not Available | Positive | 1903265 - 1903516 | 9163.15 |
| ribosome maturation factor rimm | FD718_08675 | Not Available | Positive | 1903543 - 1904076 | 20059.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | FD718_08680 | Not Available | Positive | 1904103 - 1904849 | 27776.2 |
| 50s ribosomal protein l19 | FD718_08685 | Not Available | Positive | 1904886 - 1905236 | 13072.9 |
| glycine zipper 2tm domain-containing protein | FD718_08690 | Not Available | Positive | 1905424 - 1905888 | 15194.3 |
| carbon starvation protein a | FD718_08695 | Not Available | Negative | 1906004 - 1907482 | 53308.0 |
| duf2799 domain-containing protein | FD718_08700 | Not Available | Positive | 1907717 - 1908100 | 14359.8 |
| two-component system response regulator btsr | FD718_08705 | Not Available | Negative | 1908104 - 1908817 | 27230.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


