Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | FD718_08560 | Not Available | Negative | 1879100 - 1880320 | 45026.9 |
| hypothetical protein | FD718_08565 | Not Available | Negative | 1880521 - 1881675 | 44147.6 |
| gtra family protein | FD718_08570 | Not Available | Negative | 1881672 - 1882052 | 14411.9 |
| glycosyltransferase | FD718_08575 | Not Available | Negative | 1882045 - 1883025 | 37164.8 |
| riboflavin synthase subunit alpha | FD718_08580 | Not Available | Negative | 1883018 - 1883578 | 21051.4 |
| qace family quaternary ammonium compound efflux smr transporter | FD718_08585 | Not Available | Positive | 1883913 - 1884266 | 12478.0 |
| amino acid permease | FD718_08590 | Not Available | Negative | 1884351 - 1885745 | 50726.1 |
| dmt family transporter | FD718_08595 | Not Available | Negative | 1886013 - 1886915 | 33159.5 |
| hypothetical protein | FD718_08600 | Not Available | Negative | 1887275 - 1887571 | 11613.9 |
| hypothetical protein | FD718_08605 | Not Available | Negative | 1887795 - 1888025 | 8576.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


