Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | FD718_08460 | Not Available | Negative | 1848814 - 1849917 | 41724.7 |
| hypothetical protein | FD718_08465 | Not Available | Negative | 1850126 - 1850893 | 28136.8 |
| atp-dependent helicase | FD718_08470 | Not Available | Positive | 1851186 - 1853510 | 89876.4 |
| dicarboxylate/amino acid:cation symporter | FD718_08475 | Not Available | Negative | 1853612 - 1854865 | 44051.5 |
| s-(hydroxymethyl)glutathione synthase | FD718_08480 | Not Available | Negative | 1855387 - 1855959 | 20622.6 |
| nad(p)/fad-dependent oxidoreductase | FD718_08485 | Not Available | Negative | 1856102 - 1857325 | 44749.8 |
| nad(p)/fad-dependent oxidoreductase | FD718_08490 | Not Available | Negative | 1857593 - 1858804 | 44286.4 |
| sulp family inorganic anion transporter | FD718_08495 | Not Available | Positive | 1859659 - 1861380 | 61853.1 |
| divalent metal cation transporter | FD718_08500 | Not Available | Negative | 1861501 - 1862733 | 43176.2 |
| rida family protein | FD718_08505 | Not Available | Positive | 1863031 - 1863504 | 16994.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


