Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | FD718_08410 | Not Available | Negative | 1834294 - 1834821 | 19605.0 |
| extracellular solute-binding protein | FD718_08415 | Not Available | Positive | 1835088 - 1836263 | 44570.5 |
| ggdef domain-containing protein | FD718_08420 | Not Available | Positive | 1836296 - 1838353 | 78216.6 |
| glucose-6-phosphate dehydrogenase | FD718_08425 | Not Available | Positive | 1838831 - 1840330 | 56677.1 |
| 6-phosphogluconolactonase | FD718_08430 | Not Available | Positive | 1840333 - 1841049 | 26695.6 |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | FD718_08435 | Not Available | Positive | 1841060 - 1842508 | 52694.0 |
| alanine:cation symporter family protein | FD718_08440 | Not Available | Positive | 1842817 - 1844370 | 55111.6 |
| trimethylamine-n-oxide reductase tora | FD718_08445 | Not Available | Negative | 1844433 - 1846895 | 92760.9 |
| pentaheme c-type cytochrome torc | FD718_08450 | Not Available | Negative | 1846916 - 1848094 | 44112.9 |
| trimethylamine n-oxide reductase system protein tore | FD718_08455 | Not Available | Negative | 1848132 - 1848308 | 6571.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


