Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4250 domain-containing protein | FD718_08305 | Not Available | Positive | 1813582 - 1813770 | 7260.72 |
| meta domain-containing protein | FD718_08315 | Not Available | Negative | 1814077 - 1814529 | 16135.5 |
| mechanosensitive ion channel family protein | FD718_08320 | Not Available | Negative | 1814922 - 1816565 | 62114.2 |
| hypothetical protein | FD718_08325 | Not Available | Negative | 1816732 - 1817118 | 14829.0 |
| ggdef domain-containing protein | FD718_08330 | Not Available | Positive | 1817407 - 1819104 | 65671.7 |
| phosphate abc transporter atp-binding protein | FD718_08335 | Not Available | Negative | 1819244 - 1819993 | 28055.0 |
| phosphate abc transporter permease psta | FD718_08340 | Not Available | Negative | 1820016 - 1820882 | 31603.3 |
| phosphate abc transporter permease subunit pstc | FD718_08345 | Not Available | Negative | 1820888 - 1821802 | 32107.6 |
| phosphate abc transporter substrate-binding protein | FD718_08350 | Not Available | Negative | 1821890 - 1822711 | 28489.9 |
| methyl-accepting chemotaxis protein | FD718_08355 | Not Available | Positive | 1823105 - 1824733 | 59393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


