Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grxa family glutaredoxin | FD718_08095 | Not Available | Positive | 1761299 - 1761565 | 10032.0 |
| transporter | FD718_08100 | Not Available | Positive | 1761879 - 1763561 | 60499.1 |
| response regulator | FD718_08105 | Not Available | Positive | 1763788 - 1764462 | 25505.7 |
| ghkl domain-containing protein | FD718_08110 | Not Available | Positive | 1764472 - 1765818 | 50597.3 |
| trans-2-enoyl-coa reductase family protein | FD718_08115 | Not Available | Negative | 1765892 - 1767094 | 44236.6 |
| acyl-coa dehydrogenase | FD718_08120 | Not Available | Negative | 1767287 - 1769563 | 83140.8 |
| tetr/acrr family transcriptional regulator | FD718_08125 | Not Available | Negative | 1769680 - 1770348 | 25304.5 |
| m20 family metallopeptidase | FD718_08130 | Not Available | Negative | 1770667 - 1771797 | 40784.6 |
| sdr family oxidoreductase | FD718_08135 | Not Available | Negative | 1772717 - 1773565 | 31050.3 |
| hypothetical protein | FD718_08150 | Not Available | Negative | 1774568 - 1775398 | 30720.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


