Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase | FD718_08045 | Not Available | Negative | 1749432 - 1750949 | 54563.5 |
| aminodeoxychorismate synthase component i | FD718_08050 | Not Available | Positive | 1751112 - 1752521 | 52874.5 |
| coa pyrophosphatase | FD718_08055 | Not Available | Positive | 1752586 - 1753185 | 22709.5 |
| septum formation protein | FD718_08060 | Not Available | Positive | 1753376 - 1754629 | 44994.1 |
| l-serine ammonia-lyase | FD718_08065 | Not Available | Positive | 1754866 - 1756227 | 48936.9 |
| arac family transcriptional regulator | FD718_08070 | Not Available | Positive | 1756767 - 1757645 | 33184.9 |
| marr family transcriptional regulator | FD718_08075 | Not Available | Negative | 1757717 - 1758148 | 16502.3 |
| duf3861 domain-containing protein | FD718_08080 | Not Available | Positive | 1758255 - 1758572 | 12084.6 |
| hypothetical protein | FD718_08085 | Not Available | Negative | 1758654 - 1759241 | 20921.2 |
| iron-containing alcohol dehydrogenase | FD718_08090 | Not Available | Negative | 1759709 - 1760926 | 43789.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


