Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | FD718_07995 | Not Available | Negative | 1737152 - 1737691 | 20686.6 |
| phosphotransferase | FD718_08000 | Not Available | Negative | 1737824 - 1738681 | 32829.5 |
| penicillin-binding protein activator lpob | FD718_08005 | Not Available | Negative | 1738716 - 1739375 | 23988.5 |
| duf1425 domain-containing protein | FD718_08010 | Not Available | Negative | 1739453 - 1739872 | 15087.3 |
| purine nucleoside phosphoramidase | FD718_08015 | Not Available | Negative | 1739959 - 1740309 | 13127.2 |
| methyl-accepting chemotaxis protein | FD718_08020 | Not Available | Positive | 1740543 - 1742546 | 74321.0 |
| dihydroorotase | FD718_08025 | Not Available | Positive | 1742681 - 1743709 | 37680.0 |
| efflux rnd transporter permease subunit | FD718_08030 | Not Available | Negative | 1743840 - 1746914 | 113576.0 |
| efflux rnd transporter periplasmic adaptor subunit | FD718_08035 | Not Available | Negative | 1746914 - 1748008 | 39932.9 |
| efflux rnd transporter periplasmic adaptor subunit | FD718_08040 | Not Available | Negative | 1748010 - 1749047 | 38082.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


