Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase | FD718_07885 | Not Available | Negative | 1713074 - 1713700 | 23443.6 |
| miniconductance mechanosensitive channel mscm | FD718_07895 | Not Available | Positive | 1714559 - 1717867 | 126488.0 |
| class i poly(r)-hydroxyalkanoic acid synthase | FD718_07900 | Not Available | Negative | 1717956 - 1719728 | 67412.3 |
| phasin family protein | FD718_07905 | Not Available | Negative | 1719788 - 1720135 | 13199.8 |
| acetyl-coa c-acetyltransferase | FD718_07910 | Not Available | Negative | 1720180 - 1721385 | 41513.1 |
| sdr family oxidoreductase | FD718_07915 | Not Available | Negative | 1721399 - 1722139 | 26340.8 |
| l-alanine exporter alae | FD718_07920 | Not Available | Negative | 1722471 - 1722923 | 16595.5 |
| ofa family mfs transporter | FD718_07925 | Not Available | Negative | 1723237 - 1724448 | 42657.3 |
| response regulator transcription factor | FD718_07930 | Not Available | Negative | 1724698 - 1725417 | 27645.4 |
| sensor histidine kinase | FD718_07935 | Not Available | Negative | 1725436 - 1727064 | 60160.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


