Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | FD718_07525 | Not Available | Positive | 1632832 - 1633530 | 25585.5 |
| duf423 domain-containing protein | FD718_07530 | Not Available | Positive | 1633535 - 1633939 | 14271.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | FD718_07535 | Not Available | Positive | 1633949 - 1635037 | 41538.2 |
| flap endonuclease xni | FD718_07540 | Not Available | Negative | 1635094 - 1635870 | 28600.2 |
| log family protein | FD718_07545 | Not Available | Negative | 1635942 - 1637318 | 51244.7 |
| diguanylate cyclase | FD718_07550 | Not Available | Negative | 1637509 - 1639059 | 59827.8 |
| ggdef domain-containing protein | FD718_07555 | Not Available | Negative | 1639209 - 1641485 | 87587.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | FD718_07560 | Not Available | Negative | 1641605 - 1642453 | 32506.2 |
| secy-interacting protein | FD718_07565 | Not Available | Positive | 1642586 - 1643140 | 20678.8 |
| hypothetical protein | FD718_07570 | Not Available | Positive | 1643143 - 1643916 | 29139.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


