Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae strain 144bp-OG3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | coastal waters; estuaries; Marine; oceans; seaweeds; sediments |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Pancrustacea, Aves |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418061 bp
Thymine Count
1414440 bp
Guanine Count
971104 bp
Cytosine Count
957116 bp
Genome Length
4760721 bp
Protein-coding Genes
4126 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FD718_04965 | Not Available | Positive | 1065195 - 1065674 | 17721.9 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | FD718_04970 | Not Available | Negative | 1065682 - 1066179 | 18057.8 |
| two-component system response regulator arca | FD718_04975 | Not Available | Positive | 1066843 - 1067562 | 27412.9 |
| aerobic respiration two-component sensor histidine kinase arcb | FD718_04980 | Not Available | Negative | 1067641 - 1070007 | 89239.3 |
| sensor domain-containing diguanylate cyclase | FD718_04985 | Not Available | Negative | 1070148 - 1071959 | 68692.9 |
| tigr01212 family radical sam protein | FD718_04990 | Not Available | Negative | 1072151 - 1073080 | 34624.6 |
| glutamate synthase large subunit | FD718_04995 | Not Available | Positive | 1073724 - 1078271 | 167987.0 |
| glutamate synthase subunit beta | FD718_05000 | Not Available | Positive | 1078264 - 1079730 | 53159.3 |
| hypothetical protein | FD718_05010 | Not Available | Negative | 1083910 - 1084821 | 33618.5 |
| hypothetical protein | FD718_05015 | Not Available | Negative | 1084787 - 1085503 | 27251.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Haemorrhagic septicemia | Causes | PMC12895208 |
| Skin lesions | Causes | PMC12895208 |
| Necrotizing fasciitis | Causes | PMC12895208 |
| Soft-tissue infection | Causes | PMC8231020 |
| Chronic suppurative pneumonia | Causes | PMC9796189 |
| Splenic lymphoid depletion | Causes | PMC9796189 |
| Wound infections | Causes | PMC9796189 |
| Hemorrhagic septicemia | Causes | PMC9796189 |
| Pneumonia | Causes | PMC9796189 |


