Clostridioides difficile strain WCH065050 115

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptostreptococcaceae

Genus

Clostridioides

Description

Clostridioides difficile strain WCH065050 115 is a Gram-positive, anaerobic, mesophilic rod that exhibits mobility through the presence of flagella. This strain is a chemoorganotroph, deriving its energy from organic compounds, and typically grows in chains, pairs, or as singles. Its optimal growth temperature is 37°C, aligning with the typical body temperature of its primary hosts. This strain is associated with several hosts, including Homo sapiens (humans), Gallus gallus (chickens), Metazoa, Sus scrofa (pigs), Canis lupus familiaris (domestic dogs), and Felis catus (domestic cats), indicating a broad ecological adaptability. As a free-living organism, C. difficile can thrive in diverse environments, particularly within the gastrointestinal tracts of these hosts. Clostridioides difficile strain WCH065050 115 is notably pathogenic in humans, causing a range of health effects including diarrhea, colitis, and severe gastrointestinal conditions such as pseudomembranous colitis and toxic megacolon. It is well-known for its role in healthcare-associated infections, particularly in hospital settings, where it can lead to antibiotic-associated diarrhea and persistent infections. Given its pathogenic potential and association with various hosts, the presence of this strain in healthcare settings underscores the importance of monitoring and managing antibiotic use to mitigate the risk of C. difficile infections. This highlights the ecological interplay between antibiotic use in humans and the emergence of resistant strains in different host species.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptostreptococcaceae
GenusClostridioides
SpeciesClostridioides difficile
Strainstrain WCH065050 115

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridioides difficile strain WCH065050 115
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Clostridioides difficile strain WCH065050 115, whole genome

Gene Summary

Adenine Count

1403282 bp

Thymine Count

1437287 bp

Guanine Count

544832 bp

Cytosine Count

580623 bp

Genome Length

3966024 bp

Protein-coding Genes

3391 genes

Non-Coding Genes

177 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trna-ileNot AvailableNot AvailablePositive3946030 - 3946106Not Available
Trna-pheNot AvailableNot AvailablePositive3946110 - 3946185Not Available
Trna-metNot AvailableNot AvailablePositive3946193 - 3946269Not Available
diaminopropionate ammonia-lyaseEDC95_18435Not AvailablePositive3947999 - 394831411260.2
m20/m25/m40 family metallo-hydrolaseEDC95_18440Not AvailablePositive3948440 - 394883514626.3
duf2634 domain-containing proteinEDC95_18445Not AvailableNegative3948836 - 39490749205.84
hypothetical proteinEDC95_18450Not AvailableNegative3949049 - 394941413468.3
xkdqEDC95_18455Not AvailableNegative3949407 - 39496589456.28
atp-grasp domain-containing proteinEDC95_18460Not AvailableNegative3950481 - 395120226448.0
diaminopropionate ammonia-lyaseEDC95_18465Not AvailableNegative3951203 - 395187924251.5

Displaying genes 3501 – 3510 of 3568 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Severe diarrheaCausesPMC10881109
ColitisCausesPMC12366080
ColitisCausesPMC5288394
DiarrheaCausesPMC10169446
Persistent infectionCausesPMC11306097
CdiCausesPMC11354687
Healthcare-associated colitisCausesPMC11355982
Pseudomembranous colitisCausesPMC11355982
Toxic megacolonCausesPMC11355982
EnterocolitisCausesPMC11355982

Displaying health effects 1 – 10 of 38 in total