Rhodobacteraceae bacterium THAF1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium THAF1 is a member of the Rhodobacteraceae family, known for its role in various ecological processes. This bacterium is characterized by having a single replicon, which is indicative of its genetic structure. The genome of Rhodobacteraceae bacterium THAF1 is accessible via the accession UXAS00000000.1, providing researchers with a reference point for further studies. Members of the Rhodobacteraceae family are often recognized for their phototrophic capabilities, which allow them to harness light energy for growth. While specific metabolic pathways of THAF1 are not detailed, the family typically includes organisms that contribute to nutrient cycling in aquatic environments, potentially influencing both the carbon and nitrogen cycles. The presence of a single replicon suggests a streamlined genomic organization, which may be advantageous for adaptability in various environmental conditions. This trait can enhance the bacterium's survival and proliferation in competitive ecosystems. In summary, Rhodobacteraceae bacterium THAF1 serves as a representative of its family, with a simple genetic architecture that may facilitate its ecological roles. Understanding its genome could shed light on the functional contributions of Rhodobacteraceae members to their habitats, particularly in nutrient cycling and energy transformation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium THAF1 isolate aTHAF1 genome assembly,

Gene Summary

Adenine Count

609462 bp

Thymine Count

612052 bp

Guanine Count

1053619 bp

Cytosine Count

1047608 bp

Genome Length

3322741 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-hydroxybutyryl-coa dehydrogenasePARPLA_03246Not AvailablePositive3191084 - 319195630390.5
acyl-coa dehydrogenase fade12PARPLA_03247Not AvailablePositive3191966 - 319314141759.8
long-chain-fatty-acid--coa ligase fadd13PARPLA_03248Not AvailablePositive3193168 - 319467653690.2
hypothetical proteinPARPLA_03249Not AvailablePositive3194673 - 319543427910.9
carnitinyl-coa dehydratasePARPLA_03250Not AvailablePositive3195431 - 319618926681.0
lactate-binding periplasmic protein precursorPARPLA_03251Not AvailablePositive3196251 - 319737839865.4
tripartite atp-independent periplasmic transporters, dctq componentPARPLA_03252Not AvailablePositive3197390 - 319794719582.4
sialic acid trap transporter permease protein siatPARPLA_03253Not AvailablePositive3197940 - 319924445037.3
3-ketoacyl-coa thiolasePARPLA_03254Not AvailablePositive3199261 - 320044241561.8
3-keto-5-aminohexanoate cleavage enzymePARPLA_03255Not AvailableNegative3200480 - 320140333397.2

Displaying genes 3251 – 3260 of 3363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.