Rhodobacteraceae bacterium THAF1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium THAF1 is a member of the Rhodobacteraceae family, known for its role in various ecological processes. This bacterium is characterized by having a single replicon, which is indicative of its genetic structure. The genome of Rhodobacteraceae bacterium THAF1 is accessible via the accession UXAS00000000.1, providing researchers with a reference point for further studies. Members of the Rhodobacteraceae family are often recognized for their phototrophic capabilities, which allow them to harness light energy for growth. While specific metabolic pathways of THAF1 are not detailed, the family typically includes organisms that contribute to nutrient cycling in aquatic environments, potentially influencing both the carbon and nitrogen cycles. The presence of a single replicon suggests a streamlined genomic organization, which may be advantageous for adaptability in various environmental conditions. This trait can enhance the bacterium's survival and proliferation in competitive ecosystems. In summary, Rhodobacteraceae bacterium THAF1 serves as a representative of its family, with a simple genetic architecture that may facilitate its ecological roles. Understanding its genome could shed light on the functional contributions of Rhodobacteraceae members to their habitats, particularly in nutrient cycling and energy transformation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium THAF1 isolate aTHAF1 genome assembly,

Gene Summary

Adenine Count

609462 bp

Thymine Count

612052 bp

Guanine Count

1053619 bp

Cytosine Count

1047608 bp

Genome Length

3322741 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome c oxidase caa3 assembly factor (caa3_ctag)PARPLA_02766Not AvailableNegative2717411 - 271797719880.3
hypothetical proteinPARPLA_02767Not AvailableNegative2717974 - 271836613963.2
cytochrome c oxidase subunit 1PARPLA_02768Not AvailableNegative2718363 - 272095195009.6
cytochrome c oxidase subunit 2 precursorPARPLA_02769Not AvailableNegative2720948 - 272192534531.9
aliphatic amidase expression-regulating proteinPARPLA_02770Not AvailablePositive2722394 - 272367746639.2
high-affinity branched-chain amino acid transport system permease protein livhPARPLA_02771Not AvailablePositive2723735 - 272566368207.4
leucine/isoleucine/valine transporter permease subunitPARPLA_02772Not AvailablePositive2725749 - 272699344185.4
lipopolysaccharide export system atp-binding protein lptbPARPLA_02773Not AvailablePositive2726990 - 272772126635.0
high-affinity branched-chain amino acid transport atp-binding protein livfPARPLA_02774Not AvailablePositive2727724 - 272841925001.3
Trna-metNot AvailableNot AvailablePositive2729276 - 2729352Not Available

Displaying genes 2791 – 2800 of 3363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.