Rhodobacteraceae bacterium THAF1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Description

Rhodobacteraceae bacterium THAF1 is a member of the Rhodobacteraceae family, known for its role in various ecological processes. This bacterium is characterized by having a single replicon, which is indicative of its genetic structure. The genome of Rhodobacteraceae bacterium THAF1 is accessible via the accession UXAS00000000.1, providing researchers with a reference point for further studies. Members of the Rhodobacteraceae family are often recognized for their phototrophic capabilities, which allow them to harness light energy for growth. While specific metabolic pathways of THAF1 are not detailed, the family typically includes organisms that contribute to nutrient cycling in aquatic environments, potentially influencing both the carbon and nitrogen cycles. The presence of a single replicon suggests a streamlined genomic organization, which may be advantageous for adaptability in various environmental conditions. This trait can enhance the bacterium's survival and proliferation in competitive ecosystems. In summary, Rhodobacteraceae bacterium THAF1 serves as a representative of its family, with a simple genetic architecture that may facilitate its ecological roles. Understanding its genome could shed light on the functional contributions of Rhodobacteraceae members to their habitats, particularly in nutrient cycling and energy transformation processes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacteraceae bacterium THAF1 isolate aTHAF1 genome assembly,

Gene Summary

Adenine Count

609462 bp

Thymine Count

612052 bp

Guanine Count

1053619 bp

Cytosine Count

1047608 bp

Genome Length

3322741 bp

Protein-coding Genes

3292 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dtdp-glucose 4,6-dehydratasePARPLA_02736Not AvailableNegative2687307 - 268832338329.5
putative hydroxypyruvate reductasePARPLA_02737Not AvailableNegative2688408 - 268966142473.2
hypothetical proteinPARPLA_02738Not AvailableNegative2689651 - 269034625434.8
cytochrome cPARPLA_02739Not AvailableNegative2690547 - 269178245501.2
uric acid degradation bifunctional protein puclPARPLA_02740Not AvailablePositive2691865 - 269327452055.0
ureidoglycolate lyasePARPLA_02741Not AvailablePositive2693271 - 269376217369.5
high-affinity zinc uptake system membrane protein znubPARPLA_02742Not AvailableNegative2693764 - 269457027454.4
zinc import atp-binding protein znucPARPLA_02743Not AvailableNegative2694570 - 269532227101.8
zinc uptake regulation proteinPARPLA_02744Not AvailableNegative2695319 - 269582517818.1
high-affinity zinc uptake system protein znua precursorPARPLA_02745Not AvailablePositive2695881 - 269683433326.4

Displaying genes 2761 – 2770 of 3363 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.