Klebsiella pneumoniae strain EuSCAPE_LU003

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_LU003 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism as a chemoheterotroph. This strain is characterized by its ability to form chains, pairs, or exist as single cells. It possesses flagella, which contributes to its motility, and has a temperature range classified as mesophilic, with an optimal growth temperature of 37°C. This bacterium is primarily associated with various hosts, including Homo sapiens, Gallus gallus, and numerous other animal species such as Danio rerio and Canis lupus familiaris. K. pneumoniae strain EuSCAPE_LU003 is known for its pathogenicity in humans, causing a wide range of health issues, including bacteremia, urinary tract infections, pneumonia, and sepsis, among others. The strain is nonsporulating and contains a single replicon and two membranes. In an ecological context, K. pneumoniae can be classified as free-living, indicating its potential to exist independently in various environments, including those associated with its diverse host species. Its significant association with human infections underscores its role as a major opportunistic pathogen, particularly in healthcare settings. The versatility in its host range and pathogenic potential highlights the importance of monitoring this strain for public health, as its presence can lead to serious medical complications, particularly in immunocompromised individuals.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_LU003

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_LU003
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_LU003 genome assembly,

Gene Summary

Adenine Count

1201502 bp

Thymine Count

1196784 bp

Guanine Count

1593677 bp

Cytosine Count

1609720 bp

Genome Length

5601683 bp

Protein-coding Genes

5082 genes

Non-Coding Genes

312 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive777093 - 777105Not Available
Late control d family proteinSAMEA3649651_00781Not AvailableNegative783477 - 78463442517.9
Tail proteinSAMEA3649651_00782Not AvailableNegative784634 - 78511317307.0
Tail tape measure proteinSAMEA3649651_00783Not AvailableNegative785125 - 78756385571.9
Tail assembly proteinSAMEA3649651_00784Not AvailableNegative787708 - 7879839850.23
Major tail tube proteinSAMEA3649651_00785Not AvailableNegative788044 - 78855918826.5
Tail sheath proteinSAMEA3649651_00786Not AvailableNegative788573 - 78975442244.1
Tail proteinSAMEA3649651_00787Not AvailableNegative789864 - 79058326183.2
Hypothetical proteinSAMEA3649651_00788Not AvailableNegative790961 - 79353191580.6
Tail proteinSAMEA3649651_00789Not AvailableNegative793515 - 79413523116.1

Displaying genes 1 – 10 of 5394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total