Klebsiella pneumoniae strain EuSCAPE_ES214

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_ES214 is a significant pathogen primarily associated with human health, exhibiting a range of pathogenic effects including bacteremia, urinary tract infections, pneumonia, and sepsis. This Gram-negative bacterium is rod-shaped and has a facultative anaerobic metabolism, utilizing chemoheterotrophic energy sources. The strain is known for its mobility, characterized by the presence of flagella, and typically forms chains, pairs, or single cells. EuSCAPE_ES214 thrives optimally at 37°C, falling within the mesophilic temperature range. It possesses a single replicon and is surrounded by a double membrane, consistent with its classification as a member of the Enterobacteriaceae family. The strain demonstrates a free-living biotic relationship, indicating its adaptability to various environments. This bacterium has a diverse host range, affecting not only humans (Homo sapiens) but also a variety of other species, including domestic animals and wildlife such as Gallus gallus, Canis lupus familiaris, and Sus scrofa. This broad host spectrum may facilitate its transmission and persistence in different ecological niches, thereby enhancing its role as a reservoir for antibiotic resistance genes. The health implications of Klebsiella pneumoniae strain EuSCAPE_ES214 are profound, particularly in clinical settings, where it is associated with severe infections such as neonatal sepsis and pulmonary infections. This highlights the critical need for ongoing surveillance and research into its pathogenic mechanisms and the development of effective treatment strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_ES214

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_ES214
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_ES214 genome assembly,

Gene Summary

Adenine Count

1157813 bp

Thymine Count

1161498 bp

Guanine Count

1550636 bp

Cytosine Count

1567573 bp

Genome Length

5437520 bp

Protein-coding Genes

4945 genes

Non-Coding Genes

190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized conserved proteinSAMEA3649530_02035Not AvailableNegative2137375 - 213794721530.4
ycil domain-containing proteinSAMEA3649530_02036Not AvailableNegative2137978 - 213827110743.2
arsenical resistance operon repressorSAMEA3649530_02037Not AvailablePositive2138490 - 213881912279.3
arsenic efflux pump protein arsbSAMEA3649530_02038Not AvailablePositive2138871 - 214016345603.4
arsenate reductaseSAMEA3649530_02039Not AvailablePositive2140173 - 214059515453.7
di-/tripeptide transporterSAMEA3649530_02040Not AvailablePositive2141068 - 214262155830.6
domain of uncharacterised function (duf1889)SAMEA3649530_02041Not AvailablePositive2142806 - 214310510824.0
tripartite multidrug resistance system outer membrane proteinSAMEA3649530_02042Not AvailableNegative2143371 - 214481952895.3
tripartite multidrug resistance system membrane fusion proteinSAMEA3649530_02043Not AvailableNegative2144816 - 214675370315.4
tripartite multidrug resistance system inner membrane proteinSAMEA3649530_02044Not AvailableNegative2146766 - 214779137359.2

Displaying genes 2121 – 2130 of 5135 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total