Klebsiella pneumoniae strain EuSCAPE_ES218

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_ES218 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe, thriving optimally at a temperature of 37°C within a mesophilic range. This strain exhibits mobility, as indicated by the presence of flagella, and typically arranges itself in chains, pairs, or as single cells. It is a chemoheterotroph, deriving its energy from organic compounds. EuSCAPE_ES218 is associated with a diverse range of hosts, including Homo sapiens, various species of birds (Gallus gallus, Phasianidae, Aves), mammals (Canis lupus familiaris, Sus scrofa, Ovis aries, Equidae), fish (Danio rerio), amphibians, and certain plant life (Viridiplantae). This broad host range underscores its ecological versatility and potential for zoonotic transmission. Clinically, Klebsiella pneumoniae strain EuSCAPE_ES218 is significant due to its pathogenicity in humans, causing a range of serious health effects. These include bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. The strain is also implicated in more severe conditions such as sepsis, neonatal sepsis, and liver abscesses. This bacterium's ability to thrive in diverse environments and its association with multiple hosts highlight its ecological adaptability. The presence of a single replicon and two membranes suggests a streamlined genetic and structural organization, which may facilitate its resilience in different ecological niches. As a free-living organism, Klebsiella pneumoniae strain EuSCAPE_ES218 exemplifies the complex interactions between pathogenic microbes and their hosts, emphasizing the importance of understanding its ecology for effective management of infections it causes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_ES218

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_ES218
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_ES218 genome assembly,

Gene Summary

Adenine Count

1156993 bp

Thymine Count

1156132 bp

Guanine Count

1559621 bp

Cytosine Count

1536021 bp

Genome Length

5408767 bp

Protein-coding Genes

4935 genes

Non-Coding Genes

164 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-ubiquinone oxidoreductase subunit mSAMEA3649534_01159Not AvailableNegative1261888 - 126341756472.0
nadh:ubiquinone oxidoreductase subunit lSAMEA3649534_01160Not AvailableNegative1263587 - 126542866357.0
nadh-ubiquinone oxidoreductase subunit kSAMEA3649534_01161Not AvailableNegative1265425 - 126572710798.7
nadh-ubiquinone oxidoreductase subunit jSAMEA3649534_01162Not AvailableNegative1265724 - 126627819825.8
nadh dehydrogenase subunit iSAMEA3649534_01163Not AvailableNegative1266290 - 126683220433.7
nadh-ubiquinone oxidoreductase subunit hSAMEA3649534_01164Not AvailableNegative1266847 - 126782436259.1
nadh-ubiquinone oxidoreductase subunit gSAMEA3649534_01165Not AvailableNegative1267821 - 127054799596.2
nadh-ubiquinone oxidoreductase subunit fSAMEA3649534_01166Not AvailableNegative1270580 - 127191749158.0
nadh-ubiquinone oxidoreductase subunit eSAMEA3649534_01167Not AvailableNegative1271914 - 127241418562.0
nadh-ubiquinone oxidoreductase subunit cSAMEA3649534_01168Not AvailableNegative1272417 - 127422569113.9

Displaying genes 1261 – 1270 of 5099 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total