Klebsiella pneumoniae strain EuSCAPE_HU049

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_HU049 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, functioning as a chemoheterotroph. It typically exists in pairs, chains, or as single cells and has a mobility characterized by the presence of flagella. This strain thrives optimally at 37°C, indicating its mesophilic nature. The ecological niche of EuSCAPE_HU049 is host-associated, with a diverse range of potential hosts including Homo sapiens, Gallus gallus, various Metazoa, Viridiplantae, Danio rerio, Ovis aries, Phasianidae, Sus scrofa, Aves, Canis lupus familiaris, Amphibia, and Equidae. This broad host range underscores its adaptability and potential for transmission across different species. Clinically, K. pneumoniae strain EuSCAPE_HU049 is associated with a variety of serious health effects in humans, including bacteremia, urinary tract infections, pneumonia, and sepsis, among others. Its pathogenicity is significant, particularly in causing infections such as neonatal sepsis and pyogenic liver abscesses. The presence of a single replicon and a double membrane structure is typical for this bacterium, which reflects its evolutionary adaptations. Notably, K. pneumoniae is nonsporulating, which may influence its survival and persistence in various environments. The ecological insight drawn from this information is that Klebsiella pneumoniae strain EuSCAPE_HU049's ability to infect a wide range of hosts, combined with its diverse pathogenic potential, suggests that this strain plays a significant role in both human health and the dynamics of microbial communities associated with various animals and plants. Its versatility highlights the importance of monitoring and understanding this pathogen in both clinical and ecological contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_HU049

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_HU049
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_HU049 genome assembly,

Gene Summary

Adenine Count

1161569 bp

Thymine Count

1164920 bp

Guanine Count

1565393 bp

Cytosine Count

1549589 bp

Genome Length

5441471 bp

Protein-coding Genes

4877 genes

Non-Coding Genes

274 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Trar/dksa family transcriptional regulatorSAMEA3538833_01434Not AvailablePositive1499057 - 14992848298.08
Dna adenine methylaseSAMEA3538833_01435Not AvailablePositive1499281 - 150016833613.7
Replication endonucleaseSAMEA3538833_01436Not AvailablePositive1500149 - 150255491921.7
AttrNot AvailableNot AvailablePositive1502579 - 1502590Not Available
Hypothetical proteinSAMEA3538833_01437Not AvailablePositive1502726 - 15029147284.7
Dna damage inducible proteinSAMEA3538833_01438Not AvailablePositive1502929 - 15031629060.06
Hypothetical proteinSAMEA3538833_01439Not AvailablePositive1503237 - 15034949896.87
uncharacterised proteinSAMEA3538833_01440Not AvailablePositive1503783 - 150451429184.6
Hypothetical proteinSAMEA3538833_01441Not AvailablePositive1504511 - 150513123389.5
Portal proteinSAMEA3538833_01442Not AvailableNegative1505175 - 150619738801.2

Displaying genes 11 – 20 of 5151 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total