Klebsiella pneumoniae strain EuSCAPE_ES063

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_ES063 is a Gram-negative, rod-shaped bacterium characterized as a facultative anaerobe and a chemoheterotroph. This strain typically exhibits a variety of cell arrangements, including chains, pairs, and singles. It possesses flagella, which contributes to its mobility. The optimal growth temperature for EuSCAPE_ES063 is 37°C, categorizing it as mesophilic. This strain is host-associated, with a diverse range of hosts including Homo sapiens, various birds (Gallus gallus, Phasianidae, Aves), mammals (Canis lupus familiaris, Sus scrofa, Equidae), amphibians, and several plant species (Viridiplantae). Its ability to thrive in various environments highlights its ecological versatility, allowing it to inhabit multiple biological niches. EuSCAPE_ES063 is notable for its pathogenicity in humans, being associated with a wide array of health effects. It can cause serious infections such as bacteremia, urinary tract infections, pneumonia, and sepsis, along with other conditions like liver abscesses and meningitis. These health implications underscore the bacterium's clinical significance and its role in healthcare-associated infections. Given its pathogenic potential and broad host range, Klebsiella pneumoniae strain EuSCAPE_ES063 exemplifies the complexities of microbial interactions within host organisms and the necessity for ongoing surveillance and research. Understanding its behavior and impact on both human health and animal populations is crucial for effective management and treatment strategies in microbiology and healthcare.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_ES063

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_ES063
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_ES063 genome assembly,

Gene Summary

Adenine Count

1249771 bp

Thymine Count

1240474 bp

Guanine Count

1613940 bp

Cytosine Count

1636535 bp

Genome Length

5740720 bp

Protein-coding Genes

5356 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (guanine46-n7-)-methyltransferaseSAMEA3538935_00725Not AvailableNegative781799 - 78251827014.6
adenine dna glycosylaseSAMEA3538935_00726Not AvailablePositive782655 - 78371339557.7
fe(2+)-trafficking protein yggxSAMEA3538935_00727Not AvailablePositive783742 - 78401710920.1
membrane-bound lytic murein transglycosylase cSAMEA3538935_00728Not AvailablePositive784064 - 78514940425.0
nucleoside permease nupgSAMEA3538935_00729Not AvailablePositive785341 - 78659446268.7
ornithine decarboxylaseSAMEA3538935_00730Not AvailableNegative786638 - 78877679589.0
inner membrane protein yqgaSAMEA3538935_00731Not AvailablePositive789196 - 78990924623.6
Trna-pheNot AvailableNot AvailablePositive790015 - 790090Not Available
transposaseSAMEA3538935_00733Not AvailableNegative790488 - 7906405736.11
uncharacterised proteinSAMEA3538935_00734Not AvailableNegative790737 - 79133022638.4

Displaying genes 731 – 740 of 5438 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total