Klebsiella pneumoniae strain EuSCAPE_IT136

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT136 is a Gram-negative, rod-shaped bacterium known for its pathogenicity in humans and various other hosts, including mammals and birds. This strain is facultative anaerobic, allowing it to thrive in diverse environments by utilizing oxygen when available while also being capable of anaerobic respiration. It is a chemoheterotroph, deriving energy from organic compounds. EuSCAPE_IT136 is characterized by its cellular arrangement, which can occur in chains, pairs, or as single cells. The bacterium possesses flagella, granting it mobility, and it typically grows optimally at 37°C, fitting within a mesophilic temperature range. It has a unique cellular structure with two membranes and a single replicon. Pathologically, K. pneumoniae strain EuSCAPE_IT136 is associated with a wide range of serious health effects, including bacteremia, urinary tract infections, pneumonia, and other systemic infections. It is particularly notable for causes of neonatal sepsis and various intra-abdominal infections. The strain's ability to infect a diverse host range, including Homo sapiens, Gallus gallus, and several other vertebrates, underscores its ecological adaptability and potential for zoonotic transmission. The nonsporulating nature of EuSCAPE_IT136 suggests that its survival and persistence in the environment may rely on its ability to form biofilms or other protective structures. This adaptability is crucial for its role in both human health and disease, illustrating the complex interactions between pathogenic bacteria and their hosts in various ecological niches.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT136

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT136
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT136 genome assembly,

Gene Summary

Adenine Count

1195580 bp

Thymine Count

1204146 bp

Guanine Count

1611738 bp

Cytosine Count

1588694 bp

Genome Length

5600158 bp

Protein-coding Genes

5101 genes

Non-Coding Genes

290 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfur transfer complex subunit tusbSAMEA3515165_02962Not AvailableNegative3118286 - 311857310301.4
trna 5-methylaminomethyl-2-thiouridine synthase tuscSAMEA3515165_02963Not AvailableNegative3118581 - 311894013006.6
trna 5-methylaminomethyl-2-thiouridine synthase tusdSAMEA3515165_02964Not AvailableNegative3118940 - 311932613855.4
putative regulatorSAMEA3515165_02965Not AvailableNegative3119326 - 312004826812.1
fkbp-type peptidyl-prolyl cis-trans isomerase fkpaSAMEA3515165_02966Not AvailableNegative3120217 - 312104729405.0
protein slyxSAMEA3515165_02967Not AvailablePositive3121270 - 31214888356.03
fkbp-type peptidyl-prolyl cis-trans isomeraseSAMEA3515165_02968Not AvailableNegative3121547 - 312213420744.9
putative cytoplasmic proteinSAMEA3515165_02969Not AvailableNegative3122228 - 31224287567.1
glutathione-regulated potassium-efflux system protein kefbSAMEA3515165_02970Not AvailableNegative3122440 - 312424565964.1
glutathione-regulated potassium-efflux system ancillary protein kefgSAMEA3515165_02971Not AvailableNegative3124232 - 312479221325.5

Displaying genes 3131 – 3140 of 5391 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total