Klebsiella pneumoniae strain EuSCAPE_IT127

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT127 is a Gram-negative, rod-shaped bacterium characterized by its facultative anaerobic metabolism and chemoheterotrophic energy source. This strain exhibits a variety of cell arrangements, including chains, pairs, and singles, and possesses flagella, which contribute to its mobility. EuSCAPE_IT127 thrives at an optimal temperature of 37°C, classifying it as mesophilic. This bacterium is notably host-associated, with a diverse range of hosts including Homo sapiens, various avian species (Gallus gallus, Phasianidae, Aves), and other vertebrates such as Danio rerio, Sus scrofa, Canis lupus familiaris, and Equidae, among others. Its ability to inhabit multiple hosts indicates a flexible ecological niche, which may facilitate its spread in various environments. Klebsiella pneumoniae strain EuSCAPE_IT127 is associated with significant health impacts in humans, including bacteremia, urinary tract infections, pneumonia, intra-abdominal infections, and sepsis. The strain's pathogenicity is a serious concern, particularly in healthcare settings where it can lead to severe infections such as neonatal sepsis and pneumonia in mink. The presence of a single replicon and a double membrane structure is consistent with the characteristics of many Gram-negative bacteria, which may influence its interactions with host immune systems. Understanding the ecological roles and pathogenic potential of Klebsiella pneumoniae strain EuSCAPE_IT127 can provide insights into bacterial behavior in host-associated environments and inform strategies for managing infections it causes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT127

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT127
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT127 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5091 genes

Non-Coding Genes

286 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide transport system permease protein sapcSAMEA3515156_04043Not AvailableNegative4277546 - 427843631661.4
IntegraseSAMEA3515156_04044Not AvailablePositive4278583 - 427980046870.8
Adenine specific methyltransferaseSAMEA3515156_04045Not AvailableNegative4280008 - 428067024719.3
Hypothetical proteinSAMEA3515156_04046Not AvailableNegative4280667 - 428109516076.6
ExonucleaseSAMEA3515156_04047Not AvailableNegative4281092 - 428177225855.8
Putative phage recombination proteinSAMEA3515156_04048Not AvailableNegative4282058 - 428290331193.1
Host nuclease inhibitorSAMEA3515156_04049Not AvailableNegative4282919 - 428320310854.4
uncharacterised proteinSAMEA3515156_04050Not AvailableNegative4283292 - 42834867377.72
Hypothetical proteinSAMEA3515156_04051Not AvailablePositive4283915 - 42841187769.46
Putative para proteinSAMEA3515156_04052Not AvailableNegative4284200 - 428527639597.0

Displaying genes 71 – 80 of 5378 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total