Klebsiella pneumoniae strain EuSCAPE_IT246

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT246 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism as a chemoheterotroph. It is characterized by its mobility, facilitated by the presence of flagella, and typically arranges itself in chains, pairs, or as single cells. This strain thrives optimally at 37°C and is classified as mesophilic, indicating its growth preference for moderate temperatures. K. pneumoniae EuSCAPE_IT246 is associated with various hosts, including Homo sapiens, Gallus gallus, and multiple other metazoans, indicating its broad ecological niche. It is known to cause a wide array of health issues in humans, such as bacteremia, urinary tract infections, pneumonia, and intra-abdominal infections, among others. The pathogenicity of this strain poses significant health risks, particularly in immunocompromised individuals or those with underlying health conditions. The organism exists in a free-living state, yet it has established notable biotic relationships with numerous hosts. Its ability to cause severe infections, such as sepsis and pneumonia, underscores the importance of monitoring its presence in clinical settings. The strain does not undergo sporulation, which may influence its survival and transmission dynamics in various environments. The presence of K. pneumoniae strain EuSCAPE_IT246 in diverse hosts highlights its ecological versatility and potential for zoonotic transmission. This adaptability not only poses challenges for public health but also emphasizes the need for ongoing surveillance and research to better understand its epidemiology and the mechanisms underlying its pathogenicity.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT246

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT246
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT246 genome assembly,

Gene Summary

Adenine Count

1232666 bp

Thymine Count

1227902 bp

Guanine Count

1641673 bp

Cytosine Count

1628869 bp

Genome Length

5731110 bp

Protein-coding Genes

5136 genes

Non-Coding Genes

417 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic protein tonb, links inner and outer membranesSAMEA3538613_00246Not AvailableNegative246841 - 24729316638.0
integrating conjugative element protein, pfl_4669 familySAMEA3538613_00247Not AvailableNegative248010 - 24873226080.2
uncharacterized protein conserved in bacteria (duf2186)SAMEA3538613_00248Not AvailablePositive249147 - 25021139730.9
uncharacterised proteinSAMEA3538613_00249Not AvailablePositive250214 - 25107731450.3
uncharacterized protein conserved in bacteriaSAMEA3538613_00250Not AvailableNegative251153 - 25190828466.5
kwg repeat-containing proteinSAMEA3538613_00251Not AvailableNegative252299 - 25362750503.8
uncharacterised proteinSAMEA3538613_00252Not AvailablePositive253809 - 25468433620.5
uncharacterised proteinSAMEA3538613_00253Not AvailableNegative254769 - 25598644892.3
protein of uncharacterised function (duf2857)SAMEA3538613_00254Not AvailableNegative255986 - 25657021924.8
integrating conjugative element, pfgi_1 class, parb family proteinSAMEA3538613_00255Not AvailableNegative256570 - 25819259447.9

Displaying genes 631 – 640 of 5553 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total