Klebsiella pneumoniae strain EuSCAPE_IT248

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT248 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe and a chemoheterotroph. It typically inhabits host-associated environments, demonstrating a versatile ecological presence across various species, including Homo sapiens, Gallus gallus, and several others, including mammals, birds, and fish. EuSCAPE_IT248 exhibits a unique cell arrangement, often found in chains, pairs, or as single cells. It possesses flagella, indicating mobility, and thrives optimally at a temperature of 37°C, categorizing it as mesophilic. The bacterium has a bipartite membrane structure and contains a single replicon. This strain is notable for its pathogenic potential in humans, where it can cause a wide range of serious health issues, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. Other severe conditions associated with this strain include sepsis, meningitis, and liver abscesses, highlighting its role as a significant opportunistic pathogen. The ability of Klebsiella pneumoniae strain EuSCAPE_IT248 to inhabit multiple hosts suggests its ecological adaptability and potential for cross-species transmission. This versatility may contribute to its persistence in diverse environments and complicates infection control measures in healthcare settings, where it can lead to outbreaks of multidrug-resistant infections. Understanding the biology and pathogenicity of this strain is crucial for developing effective therapeutic strategies and managing its impact on public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT248

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT248
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT248 genome assembly,

Gene Summary

Adenine Count

1215762 bp

Thymine Count

1221633 bp

Guanine Count

1631437 bp

Cytosine Count

1614235 bp

Genome Length

5683067 bp

Protein-coding Genes

5135 genes

Non-Coding Genes

358 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
integrase catalytic subunitSAMEA3538615_05463Not AvailableNegative5655305 - 565618332930.5
transposase is3/is911 family proteinSAMEA3538615_05464Not AvailableNegative5656180 - 565649712146.6
uncharacterised proteinSAMEA3538615_05465Not AvailableNegative5656589 - 56568619918.57
hok/gef family proteinSAMEA3538615_05466Not AvailableNegative5657561 - 56577226009.57
is5 transposaseSAMEA3538615_05467Not AvailableNegative5657976 - 565895637858.7
uncharacterised proteinSAMEA3538615_05468Not AvailablePositive5659095 - 565982625560.4
uncharacterised proteinSAMEA3538615_05469Not AvailablePositive5659823 - 56600327622.8
putative fimbrial biogenesis periplasmic chaperoneSAMEA3538615_05470Not AvailableNegative5660272 - 566073617351.0
type 1 fimbrial protein precursorSAMEA3538615_05471Not AvailableNegative5660794 - 566131518145.3
dihydrofolate reductaseSAMEA3538615_05472Not AvailablePositive5661436 - 566193318127.9

Displaying genes 5471 – 5480 of 5493 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total