Klebsiella pneumoniae strain EuSCAPE_IT248

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT248 is a Gram-negative, rod-shaped bacterium classified as a facultative anaerobe and a chemoheterotroph. It typically inhabits host-associated environments, demonstrating a versatile ecological presence across various species, including Homo sapiens, Gallus gallus, and several others, including mammals, birds, and fish. EuSCAPE_IT248 exhibits a unique cell arrangement, often found in chains, pairs, or as single cells. It possesses flagella, indicating mobility, and thrives optimally at a temperature of 37°C, categorizing it as mesophilic. The bacterium has a bipartite membrane structure and contains a single replicon. This strain is notable for its pathogenic potential in humans, where it can cause a wide range of serious health issues, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. Other severe conditions associated with this strain include sepsis, meningitis, and liver abscesses, highlighting its role as a significant opportunistic pathogen. The ability of Klebsiella pneumoniae strain EuSCAPE_IT248 to inhabit multiple hosts suggests its ecological adaptability and potential for cross-species transmission. This versatility may contribute to its persistence in diverse environments and complicates infection control measures in healthcare settings, where it can lead to outbreaks of multidrug-resistant infections. Understanding the biology and pathogenicity of this strain is crucial for developing effective therapeutic strategies and managing its impact on public health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT248

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT248
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT248 genome assembly,

Gene Summary

Adenine Count

1215762 bp

Thymine Count

1221633 bp

Guanine Count

1631437 bp

Cytosine Count

1614235 bp

Genome Length

5683067 bp

Protein-coding Genes

5135 genes

Non-Coding Genes

358 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transthyretin family proteinSAMEA3538615_03560Not AvailablePositive3723646 - 372404714719.7
atp-nad/acox kinaseSAMEA3538615_03561Not AvailableNegative3724126 - 37242966314.55
citrate synthase (si)SAMEA3538615_03562Not AvailablePositive3724807 - 372611147940.4
uncharacterised proteinSAMEA3538615_03563Not AvailableNegative3726164 - 372646911614.2
response regulator (activator) in two-component regulatory system wtih uhpbSAMEA3538615_03564Not AvailableNegative3726447 - 372710924682.4
fimbrial proteinSAMEA3538615_03565Not AvailablePositive3727581 - 372814119711.3
putative pilin chaperoneSAMEA3538615_03566Not AvailablePositive3728200 - 372889525364.7
outer membrane proteinSAMEA3538615_03567Not AvailablePositive3728906 - 373134188778.8
fimbrial subunitSAMEA3538615_03568Not AvailablePositive3731343 - 373236836157.8
putative gnat-family acetyltransferaseSAMEA3538615_03569Not AvailableNegative3732391 - 373325733705.1

Displaying genes 3781 – 3790 of 5493 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total