Klebsiella pneumoniae strain EuSCAPE_IT249

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Klebsiella

Description

Klebsiella pneumoniae strain EuSCAPE_IT249 is a gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, utilizing chemoheterotrophic energy sources. It is characterized by its mobility, facilitated by the presence of flagella, and typically exists in various arrangements, including chains, pairs, and singles. This strain thrives optimally at 37°C, comfortably fitting within the mesophilic temperature range. As a pathogen, K. pneumoniae strain EuSCAPE_IT249 is associated with a wide array of health complications in humans, including bacteremia, urinary tract infections, pneumonia, and various intra-abdominal infections. It is known to cause severe conditions such as sepsis and neonatal sepsis, as well as pyogenic liver abscesses and emphysematous pyelonephritis. The strain also poses risks in veterinary contexts, affecting hosts such as Gallus gallus (chickens), Sus scrofa (swine), and Canis lupus familiaris (domestic dogs). The ecological role of K. pneumoniae strain EuSCAPE_IT249 is multifaceted, as it is classified as free-living but also significantly impacts human health and agriculture. Its presence in diverse hosts, ranging from mammals to plants, underscores its adaptability and potential for cross-species transmission. This adaptability highlights the need for ongoing surveillance and research to better understand its pathogenic mechanisms and ecological interactions, particularly in the context of rising antibiotic resistance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusKlebsiella
SpeciesKlebsiella pneumoniae
Strainstrain EuSCAPE_IT249

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Klebsiella pneumoniae strain EuSCAPE_IT249
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Metazoa
Cell arrangementChains - Pairs - Singles
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Klebsiella pneumoniae strain EuSCAPE_IT249 genome assembly,

Gene Summary

Adenine Count

1119815 bp

Thymine Count

1126714 bp

Guanine Count

1504113 bp

Cytosine Count

1524861 bp

Genome Length

5275503 bp

Protein-coding Genes

4837 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein of uncharacterised function (duf2767)SAMEA3538616_03648Not AvailablePositive3884159 - 38843717825.69
transcriptional regulatorSAMEA3538616_03649Not AvailableNegative3884389 - 388502724236.2
4-hydroxyphenylpyruvate dioxygenaseSAMEA3538616_03650Not AvailablePositive3885154 - 388700768675.5
4-hydroxyphenylpyruvate dioxygenaseSAMEA3538616_03651Not AvailablePositive3887079 - 388840147774.2
shikimate 5-dehydrogenaseSAMEA3538616_03652Not AvailablePositive3888417 - 388925329960.5
molybdenum-binding periplasmic proteinSAMEA3538616_03653Not AvailablePositive3889310 - 389005326356.6
cobalamin/fe3+-siderophores abc transporter atpaseSAMEA3538616_03654Not AvailableNegative3890037 - 389078626919.6
putative abc transport system permease componentSAMEA3538616_03655Not AvailableNegative3890783 - 389179035087.1
putative abc transport system periplasmic binding componentSAMEA3538616_03656Not AvailableNegative3891780 - 389283839332.4
dna-binding transcriptional activator mhprSAMEA3538616_03657Not AvailableNegative3892930 - 389374230674.9

Displaying genes 3741 – 3750 of 5005 in total

Metabolites

1246 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 1246 metabolites

Health Effects

Health ConditionRelationReference
Mink pneumoniaCausesPMC11316373
EnteritisCausesPMC11316373
Urinary tract infectionCausesPMC11316373
CystitisCausesPMC11316373
PneumoniaCausesPMC11316373
MeningitisCausesPMC11316373
Liver abscessCausesPMC11316373
Endogenous endophthalmitisCausesPMC11316373
SepsisCausesPMC11316373
PneumoniaCausesPMC12198309

Displaying health effects 1 – 10 of 53 in total